Table 1.
List of gene-specific primers for the PCR analysis

Gene Primer sequence Accession number Size (bp) Annealing temperature
GAPDH 5’-gaa ggt gaa ggt cgg agt c-3’5’-gaa gat ggt gat ggg att tc -3’ NM_002046 226 53
OCT4 5’-cga cca tct gcc gct ttg ag-3’5’-ccc cct gtc ccc cat tcc ta-3’ NM_203289 573 61
SCF 5’-cca ttg atg cct tca agg ac-3’5’-ctt cca gta taa ggc tcc aa-3’ NM_000899 275 55
THY1 5’-gtc ctt tct ccc cca atc tc-3’5’-ggg aga cct gca aga ctg tt-3’ NM_006288 242 59
Vimentin (VIM) 5’-cct tcg tga ata cca cga cct gc-3’5’- ctg cca aga acc tgc agg agg-3’ NM_003380 321 63
CK18 5’-gag atc gag gct ctc aag ga-3’5’-caa gct ggc ctt cag att tc-3’ NM_000224 357 57
GATA4 5’-tcc ctc ttc cct cct caa at-3’5’-tca gcg tgt aaa ggc atc tg-3’ NM_002052 192 60
BMP4 5’-agc cat gct agt ttg ata cc-3’5’-tca ggg atg ctg ctg agg tt-3’ NM_130851 384 55
HLA -ABC 5’-gta ttt ctt cac atc cgt gtc ccg-3'5’-gtc cgc cgc ggt cca aga gcg cag-3' NM_001242758 394 70
HLA- DR 5’-ctg atg agc gct cag gaa tca t-3'5’-gtg cat tgg cca aca tag ctg-3' NM_019111 220 60
AFP 5’-ttt tgg gac ccg aac ttt cc-3’5’-ctc ctg gta tcc ttt agc aac tct-3’ NM_001134 451 57
Brachyury (T) 5’-gag ctc acc aat gag atg at-3’5’-ggc tca tac tta tgc aag ga-3’ NM_003181 335 57
NCAM1 5’-gag ggg gaa gat gcc gtg at-3’5’-ata ttc tgc ctg gcc cgg atg gta g-3’ NM_181315 269 60
Nestin(NES) 5’-gcc ctg acc act cca gtt tag-3’5’-ggg agt cct gga ttt cct tcc-3’ NM_006617 201 55
MSX1 5’-cct tcc ctt taa ccc tca cac-3’5’-ccg att tct ctg cgc ttt tct-3’ NM_002448 285 57
Slug (SNAI2) 5’-acc tcc tcc aag gac cac agt g-3’5’-cag tgt gct aca cag cag cca ga-3’ NM_003068 527 59
GalC 5’-act tcc aca atc gca tgg aa-3’5’-aac ttg gcg tag cgt gaa gtg-3’ NM_000153 696 55
CNPase 5’-aag atg tca tcc tca ggg gc-3’5’-gcg gca gga agt cct tct cca g-3’ NM_033133 505 59
β-tubulin III (TUBB3) 5’-gcc aag ttc tgg gaa gtc at-3’5’-ggc ctg aag aga tgt cca aa-3’ NM_006086 209 57
MAP2 5’-gaa gac tcg cat ccg aat gg-3’5’-cgc agg ata gga gga aga gac t-3’ NM_004759 527 59
SOX9 5’-gaa cgc aca tca aga cgg ag-3’5’-tct cgt tga ttt cgc tgc tc-3’ NM_000346 631 57
Synaptophysin (SYP) 5’-ttc tgc ctc gct taa agc ct-3’5’-atc tgt ctg agc cct gcc-3’ NM_003179 537 63
NEFM 5’-tgg gaa atg gct cgt cat tt-3’5’-aat tgg gcg ttt cca tga ag-3’ NM_005382 333 55
GFAP 5’-ctg gag gtt gag agg gac aat ct-3’5’-tac tgc gtg cgg atc tct ttc-3’ NM_002055 317 57
Fibronectin (FN1) 5’-agc tca tca gca tcc agc ag-3’5’-act gtg gct cat ctc cct cc -3’ NM_000638 255 60
Vitronectin (VTN) 5’-caa ggc ctg aga ccc ttc at-3’5’- tat ttc ggg ggt aat cag gg-3’ NM_000638 318 58
Heatshock 70 (HSPA1A) 5’-ttc gac gtg tcc atc ctg ac-3’5’-atg ccc tca aac agg gag tc-3’ NM_005345 260 59
Heatshock 27 (HSPB1) 5’-ctg gat gtc aac cac ttc gc-3’5’-ttt act tgg cgg cag tct ca-3’ NM_001540 327 58
Heatshock 60 (HSPD1) 5’-cca ggg tac tgg ctc ctc at-3’5’-ctt ctc gaa gcc ttc ctt gg-3’ NM_199440 349 60
Heatshock 90 (HSP90AB1) 5’-tga gga gga tga cag cgg ta-3’5’-caa aaa ggt caa agg gag cc-3’ NM_007355 266 58
Nuclear protein1 (Nupr1) 5’-tcg cac caa gag aga agc tg-3’5’-ata agt cct agg ggt ggg gg-3’ NM_012385 244 60
Actinin (ACTN1) 5’-cag aag cga agg gaa gct ct-3’5’-cgc cat att gac gtg gta gg-3’ NM_001130005 291 57
Cortactin (CTTN) 5’-aaa gtg gat aag agc gcc gt-3’5’-gcc tgt cct cct gct ctt tc-3’ NM_138565 376 59
Palladin (PALLD) 5’-tgc ctg att ctc ttc aac gc-3’5’-aag agc acc tca gac acc cc-3’ NM_014431 302 59
Synaptopodin (SYNPO) 5’-gag aag cta cgc tca tcc cc-3’5’-cct tct ccc caa aat gtc gt-3’ NM_001166209 291 59
Ezrin (EZR) 5’-aca agt aca aga cgc tgc gg-3’5’-act ggg gaa aac aaa cca gg-3’ NM_003379 259 58
Gelsolin (GSN) 5’-cct aag gct ggt gca ctg aa-3’5’-ctt gtt gga gca ggc aaa ga-3’ NM-001258029 279 58
Transgelin (TAGLN) 5’-aag cat gtc att ggc ctt ca-3’5’-agt aga ggt gat ggg ggc ag-3’ NM_001001522 339 58
Caldesmon (CALD1) 5’-aag ggc ggt ctg gag ttt ta-3’5’-tcg cat ctc ctc cct ctt tt-3’ NM_033157 333 57